HL_4WQF_161

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

4WQF|1|CA|C|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQF_161 not in the Motif Atlas

Geometric match to HL_6CK5_001

Geometric discrepancy: 0.3969

The information below is about HL_6CK5_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

4WQF|1|CA|C|2143
4WQF|1|CA|U|2144
4WQF|1|CA|C|2145
4WQF|1|CA|C|2146
4WQF|1|CA|G|2147
4WQF|1|CA|G|2148

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain DK

30S ribosomal protein S11