HL_4WQF_178

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GAAGACCAC

Length

9 nucleotides

Bulged bases

4WQF|1|CA|A|2820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQF_178 not in the Motif Atlas

Homologous match to HL_7RQB_068

Geometric discrepancy: 0.0767

The information below is about HL_7RQB_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4WQF|1|CA|G|2819
4WQF|1|CA|A|2820
4WQF|1|CA|A|2821
4WQF|1|CA|G|2822
4WQF|1|CA|A|2823
4WQF|1|CA|C|2824
4WQF|1|CA|C|2825
4WQF|1|CA|A|2826
4WQF|1|CA|C|2827

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain CE

50S ribosomal protein L3

Chain CR

50S ribosomal protein L17

Chain CT

50S ribosomal protein L19