HL_4WQF_189

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQF_189 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.1085

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39665.1

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4WQF|1|DA|C|320
4WQF|1|DA|A|321
4WQF|1|DA|C|322
4WQF|1|DA|U|323
4WQF|1|DA|G|324
4WQF|1|DA|A|325
4WQF|1|DA|G|326
4WQF|1|DA|A|327
4WQF|1|DA|C|328
4WQF|1|DA|A|329
4WQF|1|DA|C|330
4WQF|1|DA|G|331
4WQF|1|DA|G|332
4WQF|1|DA|G|333

Current chains

Chain DA

16S Ribosomal RNA

Nearby chains

Chain DP

30S ribosomal protein S16

Chain DT

30S ribosomal protein S20