HL_4WQF_199

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGUCUCC

Length

7 nucleotides

Bulged bases

4WQF|1|DA|U|839

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQF_199 not in the Motif Atlas

Homologous match to HL_5J7L_018

Geometric discrepancy: 0.389

The information below is about HL_5J7L_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37344.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

4WQF|1|DA|G|837
4WQF|1|DA|G|838
4WQF|1|DA|U|839
4WQF|1|DA|C|840
4WQF|1|DA|U|841
4WQF|1|DA|C|848
4WQF|1|DA|C|849

Current chains

Chain DA

16S Ribosomal RNA

Nearby chains

Chain DB

30S ribosomal protein S2

Chain DR

30S ribosomal protein S18