HL_4WQF_215
3D structure
- PDB id
- 4WQF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GA(PSU)UGAA(MIA)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- 4WQF|1|DW|U|33, 4WQF|1|DW|A|38
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WQF_215 not in the Motif Atlas
- Homologous match to HL_4QEI_002
- Geometric discrepancy: 0.4779
- The information below is about HL_4QEI_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_10874.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
4WQF|1|DW|G|30
4WQF|1|DW|A|31
4WQF|1|DW|PSU|32
4WQF|1|DW|U|33
4WQF|1|DW|G|34
4WQF|1|DW|A|35
4WQF|1|DW|A|36
4WQF|1|DW|MIA|37
4WQF|1|DW|A|38
4WQF|1|DW|PSU|39
4WQF|1|DW|C|40
Current chains
- Chain DW
- P-site tRNA
Nearby chains
- Chain DA
- Small subunit ribosomal RNA; SSU rRNA
- Chain DI
- 30S ribosomal protein S9
- Chain DM
- 30S ribosomal protein S13
- Chain DV
- mRNA
- Chain DY
- Transfer RNA; tRNA
- Chain DZ
- 50S ribosomal protein L9,Elongation factor G
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