HL_4WQF_229

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGCGCAAGCC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQF_229 not in the Motif Atlas

Geometric match to HL_8KAL_008

Geometric discrepancy: 0.3053

The information below is about HL_8KAL_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

4WQF|1|DA|G|377
4WQF|1|DA|G|378
4WQF|1|DA|C|379
4WQF|1|DA|G|380
4WQF|1|DA|C|381
4WQF|1|DA|A|382
4WQF|1|DA|A|383
4WQF|1|DA|G|384
4WQF|1|DA|C|385
4WQF|1|DA|C|386

Current chains

Chain DA

16S Ribosomal RNA

Nearby chains

Chain DP

30S ribosomal protein S16