HL_4WQR_165

3D structure

PDB id

4WQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

4WQR|1|1H|A|1095

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQR_165 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.3342

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

4WQR|1|1H|C|1092
4WQR|1|1H|G|1093
4WQR|1|1H|U|1094
4WQR|1|1H|A|1095
4WQR|1|1H|A|1096
4WQR|1|1H|U|1097
4WQR|1|1H|A|1098
4WQR|1|1H|G|1099

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 51

50S ribosomal protein L6