HL_4WQR_203

3D structure

PDB id

4WQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GCGUCAAGC

Length

9 nucleotides

Bulged bases

4WQR|1|1H|U|2797, 4WQR|1|1H|C|2798

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQR_203 not in the Motif Atlas

Homologous match to HL_7A0S_066

Geometric discrepancy: 0.3873

The information below is about HL_7A0S_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQR|1|1H|G|2793
4WQR|1|1H|C|2794
4WQR|1|1H|G|2795
4WQR|1|1H|U|2797
4WQR|1|1H|C|2798
4WQR|1|1H|A|2799
4WQR|1|1H|A|2801
4WQR|1|1H|G|2802
4WQR|1|1H|C|2803

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains