HL_4WQR_221
3D structure
- PDB id
- 4WQR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- GAUUGAAAAUC
- Length
- 11 nucleotides
- Bulged bases
- 4WQR|1|3K|G|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WQR_221 not in the Motif Atlas
- Homologous match to HL_4QEI_002
- Geometric discrepancy: 0.4921
- The information below is about HL_4QEI_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38808.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
4WQR|1|3K|G|30
4WQR|1|3K|A|31
4WQR|1|3K|U|32
4WQR|1|3K|U|33
4WQR|1|3K|G|34
4WQR|1|3K|A|35
4WQR|1|3K|A|36
4WQR|1|3K|A|37
4WQR|1|3K|A|38
4WQR|1|3K|U|39
4WQR|1|3K|C|40
Current chains
- Chain 3K
- tRNA-Phe
Nearby chains
- Chain 13
- Small subunit ribosomal RNA; SSU rRNA
- Chain 2I
- 30S ribosomal protein S11
- Chain 2K
- Transfer RNA; tRNA
- Chain 4K
- mRNA
- Chain 6E
- 30S ribosomal protein S7
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