HL_4WQR_253
3D structure
- PDB id
- 4WQR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- GGGGCCCACCAGCCUAC
- Length
- 17 nucleotides
- Bulged bases
- 4WQR|1|14|A|887, 4WQR|1|14|C|888, 4WQR|1|14|C|889, 4WQR|1|14|A|896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WQR_253 not in the Motif Atlas
- Homologous match to HL_5J7L_158
- Geometric discrepancy: 0.5233
- The information below is about HL_5J7L_158
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WQR|1|14|G|880
4WQR|1|14|G|881
4WQR|1|14|G|882
4WQR|1|14|G|883
4WQR|1|14|C|884
4WQR|1|14|C|885
4WQR|1|14|C|886
4WQR|1|14|A|887
4WQR|1|14|C|888
4WQR|1|14|C|889
4WQR|1|14|A|890
4WQR|1|14|G|892
4WQR|1|14|C|893
4WQR|1|14|C|894
4WQR|1|14|U|895
4WQR|1|14|A|896
4WQR|1|14|C|897
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 1L
- Transfer RNA; tRNA
- Chain 45
- 50S ribosomal protein L16
- Chain 4A
- 30S ribosomal protein S13
- Chain D5
- 50S ribosomal protein L25
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