HL_4WQU_079

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUCGG

Length

5 nucleotides

Bulged bases

4WQU|1|BA|C|345

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQU_079 not in the Motif Atlas

Geometric match to HL_7D81_001

Geometric discrepancy: 0.3993

The information below is about HL_7D81_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50006.2

Basepair signature

cWW-F-F

Number of instances in this motif group

5

Unit IDs

4WQU|1|BA|C|342
4WQU|1|BA|U|343
4WQU|1|BA|C|345
4WQU|1|BA|G|346
4WQU|1|BA|G|347

Current chains

Chain BA

16S Ribosomal RNA

Nearby chains

Chain AO

50S ribosomal protein L14

Chain AT

50S ribosomal protein L19

Chain BT

30S ribosomal protein S20