HL_4WQU_144

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

4WQU|1|CA|U|1396, 4WQU|1|CA|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQU_144 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.0791

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

4WQU|1|CA|G|1389
4WQU|1|CA|U|1390
4WQU|1|CA|U|1391
4WQU|1|CA|A|1392
4WQU|1|CA|A|1393
4WQU|1|CA|U|1394
4WQU|1|CA|A|1395
4WQU|1|CA|U|1396
4WQU|1|CA|U|1397
4WQU|1|CA|C|1398

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain CX

50S ribosomal protein L23