HL_4WQU_145

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CAUGGACG

Length

8 nucleotides

Bulged bases

4WQU|1|CA|U|1453

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQU_145 not in the Motif Atlas

Homologous match to HL_7RQB_037

Geometric discrepancy: 0.092

The information below is about HL_7RQB_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32426.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

1

Unit IDs

4WQU|1|CA|C|1451
4WQU|1|CA|A|1452
4WQU|1|CA|U|1453
4WQU|1|CA|G|1455
4WQU|1|CA|G|1456
4WQU|1|CA|A|1457
4WQU|1|CA|C|1458
4WQU|1|CA|G|1459

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain CR

50S ribosomal protein L17