3D structure

PDB id
4WQU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin
Experimental method
X-RAY DIFFRACTION
Resolution
2.8 Å

Loop

Sequence
GGAUCAGCCAUGCC
Length
14 nucleotides
Bulged bases
4WQU|1|DA|U|1364
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4WQU|1|DA|G|1355
4WQU|1|DA|G|1356
4WQU|1|DA|A|1357
4WQU|1|DA|U|1358
4WQU|1|DA|C|1359
4WQU|1|DA|A|1360
4WQU|1|DA|G|1361
4WQU|1|DA|C|1362
4WQU|1|DA|C|1363
4WQU|1|DA|A|1363|||A
4WQU|1|DA|U|1364
4WQU|1|DA|G|1365
4WQU|1|DA|C|1366
4WQU|1|DA|C|1367

Current chains

Chain DA
16S Ribosomal RNA

Nearby chains

Chain DC
30S ribosomal protein S3
Chain DI
30S ribosomal protein S9
Chain DJ
30S ribosomal protein S10
Chain DM
30S ribosomal protein S13
Chain DN
30S ribosomal protein S14 type Z
Chain DU
30S ribosomal protein Thx

Coloring options:

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