HL_4WQU_223

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GUGAAAGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQU_223 not in the Motif Atlas

Homologous match to HL_6CZR_093

Geometric discrepancy: 0.2443

The information below is about HL_6CZR_093

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQU|1|BA|G|1011
4WQU|1|BA|U|1012
4WQU|1|BA|G|1013
4WQU|1|BA|A|1014
4WQU|1|BA|A|1015
4WQU|1|BA|A|1016
4WQU|1|BA|G|1017
4WQU|1|BA|C|1018

Current chains

Chain BA

16S Ribosomal RNA

Nearby chains

Chain BN

30S ribosomal protein S14 type Z

Chain BS

30S ribosomal protein S19