HL_4WRA_025

3D structure

PDB id

4WRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

GUUCGGC

Length

7 nucleotides

Bulged bases

4WRA|1|13|U|1136, 4WRA|1|13|G|1139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WRA_025 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.3564

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

4WRA|1|13|G|1134
4WRA|1|13|U|1135
4WRA|1|13|U|1136
4WRA|1|13|C|1137
4WRA|1|13|G|1138
4WRA|1|13|G|1139
4WRA|1|13|C|1140

Current chains

Chain 13

16S ribosomal RNA

Nearby chains