HL_4WRA_071

3D structure

PDB id

4WRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

CCGUACGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WRA_071 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3531

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

4WRA|1|14|C|1532
4WRA|1|14|C|1533
4WRA|1|14|G|1534
4WRA|1|14|U|1535
4WRA|1|14|A|1536
4WRA|1|14|C|1537
4WRA|1|14|G|1538
4WRA|1|14|G|1539

Current chains

Chain 14

23S ribosomal RNA

Nearby chains