HL_4WRA_261

3D structure

PDB id

4WRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

GGGGCCCACCAGCCUAC

Length

17 nucleotides

Bulged bases

4WRA|1|14|C|886, 4WRA|1|14|A|887, 4WRA|1|14|C|888, 4WRA|1|14|C|889, 4WRA|1|14|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WRA|1|14|G|880
4WRA|1|14|G|881
4WRA|1|14|G|882
4WRA|1|14|G|883
4WRA|1|14|C|884
4WRA|1|14|C|885
4WRA|1|14|C|886
4WRA|1|14|A|887
4WRA|1|14|C|888
4WRA|1|14|C|889
4WRA|1|14|A|890
4WRA|1|14|G|892
4WRA|1|14|C|893
4WRA|1|14|C|894
4WRA|1|14|U|895
4WRA|1|14|A|896
4WRA|1|14|C|897

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 1L

Transfer RNA; tRNA

Chain 4A

30S ribosomal protein S13