HL_4WRO_245
3D structure
- PDB id
- 4WRO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- A(PSU)UGAA(MIA)A(PSU)
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WRO_245 not in the Motif Atlas
- Homologous match to HL_1U0B_002
- Geometric discrepancy: 0.424
- The information below is about HL_1U0B_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 29
Unit IDs
4WRO|1|3K|A|31||||P_1
4WRO|1|3K|PSU|32||||P_1
4WRO|1|3K|U|33||||P_1
4WRO|1|3K|G|34||||P_1
4WRO|1|3K|A|35||||P_1
4WRO|1|3K|A|36||||P_1
4WRO|1|3K|MIA|37||||P_1
4WRO|1|3K|A|38||||P_1
4WRO|1|3K|PSU|39||||P_1
Current chains
- Chain 3K
- tRNA-Phe
Nearby chains
- Chain 13
- Small subunit ribosomal RNA; SSU rRNA
- Chain 2I
- 30S ribosomal protein S11
- Chain 2K
- Transfer RNA; tRNA
- Chain 4K
- RNA (30-MER)
- Chain 6E
- 30S ribosomal protein S7
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