HL_4WSM_011

3D structure

PDB id

4WSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4WSM|1|13|U|421

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WSM_011 not in the Motif Atlas

Homologous match to HL_4LFB_011

Geometric discrepancy: 0.1153

The information below is about HL_4LFB_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

4WSM|1|13|C|419
4WSM|1|13|U|420
4WSM|1|13|U|421
4WSM|1|13|C|422
4WSM|1|13|G|423
4WSM|1|13|G|424

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 2E

30S ribosomal protein S3

Chain 3E

30S ribosomal protein S4