HL_4WSM_047
3D structure
- PDB id
- 4WSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGGGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WSM_047 not in the Motif Atlas
- Homologous match to HL_7RQB_016
- Geometric discrepancy: 0.0691
- The information below is about HL_7RQB_016
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_35490.2
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 299
Unit IDs
4WSM|1|14|C|487
4WSM|1|14|G|488
4WSM|1|14|G|489
4WSM|1|14|G|491
4WSM|1|14|A|492
4WSM|1|14|G|493
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain A5
- 50S ribosomal protein L22
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