HL_4WSM_219
3D structure
- PDB id
- 4WSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CUUGAG(1MG)(PSU)G
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 1MG, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WSM_219 not in the Motif Atlas
- Homologous match to HL_6UFG_007
- Geometric discrepancy: 0.2689
- The information below is about HL_6UFG_007
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.6
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
4WSM|1|2L|C|32
4WSM|1|2L|U|33
4WSM|1|2L|U|34
4WSM|1|2L|G|35
4WSM|1|2L|A|36
4WSM|1|2L|G|37
4WSM|1|2L|1MG|38
4WSM|1|2L|PSU|39
4WSM|1|2L|G|40
Current chains
- Chain 2L
- tRNA-Leu
Nearby chains
- Chain 1G
- Small subunit ribosomal RNA; SSU rRNA
- Chain 3L
- Transfer RNA; tRNA
- Chain 4L
- mRNA
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