HL_4WT1_058

3D structure

PDB id

4WT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

GGGGGCCCACCAGCCUACC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WT1|1|14|G|879
4WT1|1|14|G|880
4WT1|1|14|G|881
4WT1|1|14|G|882
4WT1|1|14|G|883
4WT1|1|14|C|884
4WT1|1|14|C|885
4WT1|1|14|C|886
4WT1|1|14|A|887
4WT1|1|14|C|888
4WT1|1|14|C|889
4WT1|1|14|A|890
4WT1|1|14|G|892
4WT1|1|14|C|893
4WT1|1|14|C|894
4WT1|1|14|U|895
4WT1|1|14|A|896
4WT1|1|14|C|897
4WT1|1|14|C|898

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 1L

Transfer RNA; tRNA

Chain 45

50S ribosomal protein L16

Chain 4A

30S ribosomal protein S13

Chain D5

50S ribosomal protein L25