HL_4WT1_084

3D structure

PDB id

4WT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

4WT1|1|14|C|2145, 4WT1|1|14|C|2146

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT1_084 not in the Motif Atlas

Homologous match to HL_7RQB_051

Geometric discrepancy: 0.2613

The information below is about HL_7RQB_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WT1|1|14|C|2143
4WT1|1|14|U|2144
4WT1|1|14|C|2145
4WT1|1|14|C|2146
4WT1|1|14|G|2147
4WT1|1|14|G|2148

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 13

Small subunit ribosomal RNA; SSU rRNA

Chain 2A

30S ribosomal protein S11

Chain 3L

Transfer RNA; tRNA