HL_4WT1_185

3D structure

PDB id

4WT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

4WT1|1|1H|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT1_185 not in the Motif Atlas

Homologous match to HL_7RQB_049

Geometric discrepancy: 0.145

The information below is about HL_7RQB_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51824.1

Basepair signature

cWW-F-F-tSH-F-F

Number of instances in this motif group

8

Unit IDs

4WT1|1|1H|G|1949
4WT1|1|1H|G|1950
4WT1|1|1H|U|1951
4WT1|1|1H|A|1952
4WT1|1|1H|A|1953
4WT1|1|1H|G|1954
4WT1|1|1H|U|1955
4WT1|1|1H|U|1956
4WT1|1|1H|C|1957

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 13

Small subunit ribosomal RNA; SSU rRNA

Chain 68

50S ribosomal protein L14