HL_4WT1_209
3D structure
- PDB id
- 4WT1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- GA(PSU)UGAA(MIA)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- 4WT1|1|1K|A|38
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WT1_209 not in the Motif Atlas
- Homologous match to HL_1B23_002
- Geometric discrepancy: 0.2123
- The information below is about HL_1B23_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WT1|1|1K|G|30
4WT1|1|1K|A|31
4WT1|1|1K|PSU|32
4WT1|1|1K|U|33
4WT1|1|1K|G|34
4WT1|1|1K|A|35
4WT1|1|1K|A|36
4WT1|1|1K|MIA|37
4WT1|1|1K|A|38
4WT1|1|1K|PSU|39
4WT1|1|1K|C|40
Current chains
- Chain 1K
- tRNA-Phe
Nearby chains
- Chain 13
- Small subunit ribosomal RNA; SSU rRNA
- Chain 1H
- Large subunit ribosomal RNA; LSU rRNA
- Chain 3I
- 30S ribosomal protein S12
- Chain 4I
- 30S ribosomal protein S13
- Chain 4K
- mRNA
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