HL_4WT1_247

3D structure

PDB id

4WT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

GGGAUGACC

Length

9 nucleotides

Bulged bases

4WT1|1|14|G|1176, 4WT1|1|14|A|1177

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT1_247 not in the Motif Atlas

Homologous match to HL_4WF9_030

Geometric discrepancy: 0.5061

The information below is about HL_4WF9_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WT1|1|14|G|1170
4WT1|1|14|G|1171
4WT1|1|14|G|1173
4WT1|1|14|A|1174
4WT1|1|14|U|1175
4WT1|1|14|G|1176
4WT1|1|14|A|1177
4WT1|1|14|C|1178
4WT1|1|14|C|1179

Current chains

Chain 14

23S ribosomal RNA

Nearby chains