HL_4WT1_255
3D structure
- PDB id
- 4WT1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- AUUGAAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WT1_255 not in the Motif Atlas
- Homologous match to HL_6GSK_203
- Geometric discrepancy: 0.1735
- The information below is about HL_6GSK_203
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.6
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
4WT1|1|1L|A|31
4WT1|1|1L|U|32
4WT1|1|1L|U|33
4WT1|1|1L|G|34
4WT1|1|1L|A|35
4WT1|1|1L|A|36
4WT1|1|1L|A|37
4WT1|1|1L|A|38
4WT1|1|1L|U|39
Current chains
- Chain 1L
- tRNA-Phe
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
- Chain 1G
- Small subunit ribosomal RNA; SSU rRNA
- Chain 3A
- 30S ribosomal protein S12
- Chain 4L
- mRNA
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