3D structure

PDB id
4WU1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
GGACCACC
Length
8 nucleotides
Bulged bases
4WU1|1|14|G|411
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4WU1_046 not in the Motif Atlas
Homologous match to HL_7RQB_014
Geometric discrepancy: 0.0695
The information below is about HL_7RQB_014
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_96598.1
Basepair signature
cWW
Number of instances in this motif group
15

Unit IDs

4WU1|1|14|G|410
4WU1|1|14|G|411
4WU1|1|14|A|412
4WU1|1|14|C|413
4WU1|1|14|C|414
4WU1|1|14|A|415
4WU1|1|14|C|416
4WU1|1|14|C|417

Current chains

Chain 14
23S ribosomal RNA

Nearby chains

Chain 35
50S ribosomal protein L15
Chain F5
50S ribosomal protein L28

Coloring options:


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