HL_4WU1_220
3D structure
- PDB id
- 4WU1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GACU(QUO)UA(MIA)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- 4WU1|1|3L|U|34
- QA status
- Modified nucleotides: QUO, MIA, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WU1_220 not in the Motif Atlas
- Homologous match to HL_2BTE_002
- Geometric discrepancy: 0.4397
- The information below is about HL_2BTE_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WU1|1|3L|G|31
4WU1|1|3L|A|32
4WU1|1|3L|C|33
4WU1|1|3L|U|34
4WU1|1|3L|QUO|35
4WU1|1|3L|U|36
4WU1|1|3L|A|37
4WU1|1|3L|MIA|38
4WU1|1|3L|A|39
4WU1|1|3L|PSU|40
4WU1|1|3L|C|41
Current chains
- Chain 3L
- tRNA-Tyr
Nearby chains
- Chain 1G
- Small subunit ribosomal RNA; SSU rRNA
- Chain 2A
- 30S ribosomal protein S11
- Chain 2L
- Transfer RNA; tRNA
- Chain 4L
- mRNA
- Chain 62
- 30S ribosomal protein S7
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