3D structure

PDB id
4WU1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
GCUAGGGGGCCCACCAGCCUACCAAAC
Length
27 nucleotides
Bulged bases
4WU1|1|1H|C|886, 4WU1|1|1H|A|887, 4WU1|1|1H|A|896
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4WU1|1|1H|G|875
4WU1|1|1H|C|876
4WU1|1|1H|U|877
4WU1|1|1H|A|878
4WU1|1|1H|G|879
4WU1|1|1H|G|880
4WU1|1|1H|G|881
4WU1|1|1H|G|882
4WU1|1|1H|G|883
4WU1|1|1H|C|884
4WU1|1|1H|C|885
4WU1|1|1H|C|886
4WU1|1|1H|A|887
4WU1|1|1H|C|888
4WU1|1|1H|C|889
4WU1|1|1H|A|890
4WU1|1|1H|G|892
4WU1|1|1H|C|893
4WU1|1|1H|C|894
4WU1|1|1H|U|895
4WU1|1|1H|A|896
4WU1|1|1H|C|897
4WU1|1|1H|C|898
4WU1|1|1H|A|899
4WU1|1|1H|A|900
4WU1|1|1H|A|901
4WU1|1|1H|C|902

Current chains

Chain 1H
23S ribosomal RNA

Nearby chains

Chain 4I
30S ribosomal protein S13
Chain 88
50S ribosomal protein L16
Chain AI
30S ribosomal protein S19
Chain H8
50S ribosomal protein L25

Coloring options:

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