HL_4WU1_242

3D structure

PDB id

4WU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GUCUC

Length

5 nucleotides

Bulged bases

4WU1|1|1G|U|841, 4WU1|1|1G|C|842, 4WU1|1|1G|U|843

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WU1_242 not in the Motif Atlas

Homologous match to HL_6CZR_089

Geometric discrepancy: 0.5825

The information below is about HL_6CZR_089

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.1

Basepair signature

cWW-F

Number of instances in this motif group

51

Unit IDs

4WU1|1|1G|G|838
4WU1|1|1G|U|841
4WU1|1|1G|C|842
4WU1|1|1G|U|843
4WU1|1|1G|C|848

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 12

30S ribosomal protein S2