HL_4WZD_229
3D structure
- PDB id
- 4WZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UUCCCAUUCCGAACA
- Length
- 15 nucleotides
- Bulged bases
- 4WZD|1|16|U|41||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WZD_229 not in the Motif Atlas
- Homologous match to HL_9DFE_067
- Geometric discrepancy: 0.1165
- The information below is about HL_9DFE_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.2
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
4WZD|1|16|U|34||||P_1
4WZD|1|16|U|35||||P_1
4WZD|1|16|C|36||||P_1
4WZD|1|16|C|37||||P_1
4WZD|1|16|C|38||||P_1
4WZD|1|16|A|39||||P_1
4WZD|1|16|U|40||||P_1
4WZD|1|16|U|41||||P_1
4WZD|1|16|C|42||||P_1
4WZD|1|16|C|43||||P_1
4WZD|1|16|G|44||||P_1
4WZD|1|16|A|45||||P_1
4WZD|1|16|A|46||||P_1
4WZD|1|16|C|47||||P_1
4WZD|1|16|A|48||||P_1
Current chains
- Chain 16
- 5S ribosomal RNA
Nearby chains
- Chain 1H
- Large subunit ribosomal RNA; LSU rRNA
- Chain 41
- 50S ribosomal protein L5
- Chain A8
- 50S ribosomal protein L18
- Chain M8
- 50S ribosomal protein L31
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