HL_4WZD_249

3D structure

PDB id

4WZD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with cognate tRNA-Tyr in the P-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCGUCAAGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WZD_249 not in the Motif Atlas

Homologous match to HL_5J7L_200

Geometric discrepancy: 0.4225

The information below is about HL_5J7L_200

Detailed Annotation

Other HL

Broad Annotation

Other HL

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

4WZD|1|1H|G|2793||||P_1
4WZD|1|1H|C|2794||||P_1
4WZD|1|1H|G|2795||||P_1
4WZD|1|1H|U|2797||||P_1
4WZD|1|1H|C|2798||||P_1
4WZD|1|1H|A|2799||||P_1
4WZD|1|1H|A|2801||||P_1
4WZD|1|1H|G|2802||||P_1
4WZD|1|1H|C|2803||||P_1

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains