HL_4WZO_110

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WZO_110 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.1054

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4WZO|1|1G|C|320
4WZO|1|1G|A|321
4WZO|1|1G|C|322
4WZO|1|1G|U|323
4WZO|1|1G|G|324
4WZO|1|1G|A|325
4WZO|1|1G|G|326
4WZO|1|1G|A|327
4WZO|1|1G|C|328
4WZO|1|1G|A|329
4WZO|1|1G|C|330
4WZO|1|1G|G|331
4WZO|1|1G|G|332
4WZO|1|1G|G|333

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 7A

30S ribosomal protein S16

Chain BA

30S ribosomal protein S20