HL_4WZO_143

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GCUUGUC

Length

7 nucleotides

Bulged bases

4WZO|1|1H|U|270|||L, 4WZO|1|1H|U|270|||M, 4WZO|1|1H|U|270|||O

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WZO_143 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3849

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

4WZO|1|1H|G|270|||J
4WZO|1|1H|C|270|||K
4WZO|1|1H|U|270|||L
4WZO|1|1H|U|270|||M
4WZO|1|1H|G|270|||N
4WZO|1|1H|U|270|||O
4WZO|1|1H|C|270|||P

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 61

50S ribosomal protein L9

Chain J8

50S ribosomal protein L28