HL_4WZO_174

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases (A, C, G, U)

1614A, 1616A, 1618A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WZO_174 not in the Motif Atlas

Homologous match to HL_7RQB_040

Geometric discrepancy: 0.1083

The information below is about HL_7RQB_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

4WZO|1|1H|C|1612
4WZO|1|1H|G|1613
4WZO|1|1H|A|1614
4WZO|1|1H|C|1615
4WZO|1|1H|A|1616
4WZO|1|1H|C|1617
4WZO|1|1H|A|1618
4WZO|1|1H|G|1619

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain E8

50S ribosomal protein L22

Chain P8

50S ribosomal protein L34