HL_4WZO_194

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGUCCACAG

Length

9 nucleotides

Bulged bases (A, C, G, U)

2477C

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WZO_194 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.3854

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87030.3

Basepair signature

cWW-F-F

Number of instances in this motif group

30

Unit IDs

4WZO|1|1H|C|2471
4WZO|1|1H|G|2472
4WZO|1|1H|U|2473
4WZO|1|1H|C|2474
4WZO|1|1H|C|2475
4WZO|1|1H|A|2476
4WZO|1|1H|C|2477
4WZO|1|1H|A|2478
4WZO|1|1H|G|2479

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 1K

Transfer RNA; tRNA

Chain 51

50S ribosomal protein L6

Chain 88

50S ribosomal protein L16