HL_4WZO_223

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CCAUGGACGAG

Length

11 nucleotides

Bulged bases

4WZO|1|14|A|1453, 4WZO|1|14|U|1454, 4WZO|1|14|A|1460

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WZO_223 not in the Motif Atlas

Homologous match to HL_7A0S_036

Geometric discrepancy: 0.5928

The information below is about HL_7A0S_036

Detailed Annotation

Pseudoknot

Broad Annotation

No text annotation

Motif group

HL_93135.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

1

Unit IDs

4WZO|1|14|C|1450
4WZO|1|14|C|1451
4WZO|1|14|A|1453
4WZO|1|14|U|1454
4WZO|1|14|G|1455
4WZO|1|14|G|1456
4WZO|1|14|A|1457
4WZO|1|14|C|1458
4WZO|1|14|G|1459
4WZO|1|14|A|1460
4WZO|1|14|G|1461

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 55

50S ribosomal protein L17