HL_4WZO_237

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GCGUCAAGC

Length

9 nucleotides

Bulged bases

4WZO|1|1H|U|2797, 4WZO|1|1H|C|2798, 4WZO|1|1H|A|2799, 4WZO|1|1H|A|2801

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WZO_237 not in the Motif Atlas

Homologous match to HL_5J7L_200

Geometric discrepancy: 0.4635

The information below is about HL_5J7L_200

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

4WZO|1|1H|G|2793
4WZO|1|1H|C|2794
4WZO|1|1H|G|2795
4WZO|1|1H|U|2797
4WZO|1|1H|C|2798
4WZO|1|1H|A|2799
4WZO|1|1H|A|2801
4WZO|1|1H|G|2802
4WZO|1|1H|C|2803

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains