HL_4XCO_001

3D structure

PDB id

4XCO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Signal-sequence induced conformational changes in the signal recognition particle

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGUAGG

Length

6 nucleotides

Bulged bases

4XCO|1|E|U|164

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4XCO_001 not in the Motif Atlas

Geometric match to HL_4XCO_003

Geometric discrepancy: 0.0757

The information below is about HL_4XCO_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37569.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

11

Unit IDs

4XCO|1|E|U|162
4XCO|1|E|G|163
4XCO|1|E|U|164
4XCO|1|E|A|165
4XCO|1|E|G|166
4XCO|1|E|G|167

Current chains

Chain E

RNA

Nearby chains

Chain B

Signal recognition particle 19 kDa protein