HL_4XCO_002

3D structure

PDB id

4XCO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Signal-sequence induced conformational changes in the signal recognition particle

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGGAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4XCO_002 not in the Motif Atlas

Homologous match to HL_4XCO_004

Geometric discrepancy: 0.045

The information below is about HL_4XCO_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

4XCO|1|E|C|208
4XCO|1|E|G|209
4XCO|1|E|G|210
4XCO|1|E|A|211
4XCO|1|E|A|212
4XCO|1|E|G|213

Current chains

Chain E

RNA

Nearby chains

Chain B

Signal recognition particle 19 kDa protein