3D structure

PDB id
4Y4P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.5 Å

Loop

Sequence
GGCCCACCAGCC
Length
12 nucleotides
Bulged bases
4Y4P|1|1A|C|935, 4Y4P|1|1A|C|936
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4Y4P|1|1A|G|929
4Y4P|1|1A|G|930
4Y4P|1|1A|C|931
4Y4P|1|1A|C|932
4Y4P|1|1A|C|933
4Y4P|1|1A|A|934
4Y4P|1|1A|C|935
4Y4P|1|1A|C|936
4Y4P|1|1A|A|937
4Y4P|1|1A|G|938
4Y4P|1|1A|C|939
4Y4P|1|1A|C|940

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 1m
30S ribosomal protein S13
Chain 1w
Transfer RNA; tRNA

Coloring options:

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