HL_4YBB_209

3D structure

PDB id

4YBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution structure of the Escherichia coli ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.1 Å

Loop

Sequence

GGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACC

Length

37 nucleotides

Bulged bases

4YBB|1|AA|A|1016, 4YBB|1|AA|U|1017, 4YBB|1|AA|U|1030, 4YBB|1|AA|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4YBB|1|AA|G|1002
4YBB|1|AA|G|1003
4YBB|1|AA|A|1004
4YBB|1|AA|A|1005
4YBB|1|AA|G|1006
4YBB|1|AA|U|1007
4YBB|1|AA|U|1008
4YBB|1|AA|U|1009
4YBB|1|AA|U|1010
4YBB|1|AA|C|1011
4YBB|1|AA|A|1012
4YBB|1|AA|G|1013
4YBB|1|AA|A|1014
4YBB|1|AA|G|1015
4YBB|1|AA|A|1016
4YBB|1|AA|U|1017
4YBB|1|AA|G|1018
4YBB|1|AA|A|1019
4YBB|1|AA|G|1020
4YBB|1|AA|A|1021
4YBB|1|AA|A|1022
4YBB|1|AA|U|1023
4YBB|1|AA|G|1024
4YBB|1|AA|U|1025
4YBB|1|AA|G|1026
4YBB|1|AA|C|1027
4YBB|1|AA|C|1028
4YBB|1|AA|U|1029
4YBB|1|AA|U|1030
4YBB|1|AA|C|1031
4YBB|1|AA|G|1032
4YBB|1|AA|G|1033
4YBB|1|AA|G|1034
4YBB|1|AA|A|1035
4YBB|1|AA|A|1036
4YBB|1|AA|C|1037
4YBB|1|AA|C|1038

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AN

30S ribosomal protein S14

Chain AS

30S ribosomal protein S19