HL_4YVI_001
3D structure
- PDB id
- 4YVI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of H. influenzae TrmD in complex with sinefungin and tRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.01 Å
Loop
- Sequence
- UAACGGUAG
- Length
- 9 nucleotides
- Bulged bases
- 4YVI|1|C|C|16, 4YVI|1|C|G|18, 4YVI|1|C|G|19, 4YVI|1|C|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_30483.1
- Basepair signature
- cWW-cWS-R
- Number of instances in this motif group
- 3
Unit IDs
4YVI|1|C|U|13
4YVI|1|C|A|14
4YVI|1|C|A|15
4YVI|1|C|C|16
4YVI|1|C|G|18
4YVI|1|C|G|19
4YVI|1|C|U|20
4YVI|1|C|A|21
4YVI|1|C|G|22
Current chains
- Chain C
- tRNA
Nearby chains
No other chains within 10ÅColoring options: