HL_4Z3S_007

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4Z3S_007 not in the Motif Atlas

Homologous match to HL_7RQB_008

Geometric discrepancy: 0.0382

The information below is about HL_7RQB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67216.7

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

9

Unit IDs

4Z3S|1|1A|C|246
4Z3S|1|1A|G|247
4Z3S|1|1A|G|248
4Z3S|1|1A|C|249
4Z3S|1|1A|G|250
4Z3S|1|1A|A|251
4Z3S|1|1A|G|252

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 11

50S ribosomal protein L28

Chain 18

50S ribosomal protein L35

Chain 1P

50S ribosomal protein L15

Chain 1y

Transfer RNA; tRNA