HL_4Z3S_028

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

4Z3S|1|1A|A|1067, 4Z3S|1|1A|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4Z3S_028 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.397

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4Z3S|1|1A|C|1064
4Z3S|1|1A|U|1065
4Z3S|1|1A|U|1066
4Z3S|1|1A|A|1067
4Z3S|1|1A|G|1068
4Z3S|1|1A|A|1069
4Z3S|1|1A|A|1070
4Z3S|1|1A|G|1071
4Z3S|1|1A|C|1072
4Z3S|1|1A|A|1073
4Z3S|1|1A|G|1074

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains