HL_4Z3S_055
3D structure
- PDB id
- 4Z3S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.65 Å
Loop
- Sequence
- CGCAAGGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4Z3S_055 not in the Motif Atlas
- Homologous match to HL_7RQB_056
- Geometric discrepancy: 0.0529
- The information below is about HL_7RQB_056
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_12078.4
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 31
Unit IDs
4Z3S|1|1A|C|2324
4Z3S|1|1A|G|2325
4Z3S|1|1A|C|2326
4Z3S|1|1A|A|2327
4Z3S|1|1A|A|2328
4Z3S|1|1A|G|2329
4Z3S|1|1A|G|2330
4Z3S|1|1A|G|2331
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 10
- 50S ribosomal protein L27
- Chain 1G
- 50S ribosomal protein L5
- Chain 1Q
- 50S ribosomal protein L16
- Chain 1x
- Transfer RNA; tRNA
Coloring options: