3D structure

PDB id
4Z3S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.65 Å

Loop

Sequence
CAUUCCG
Length
7 nucleotides
Bulged bases
4Z3S|1|1B|U|41
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4Z3S_069 not in the Motif Atlas
Homologous match to HL_7RQB_070
Geometric discrepancy: 0.0613
The information below is about HL_7RQB_070
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_87939.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
8

Unit IDs

4Z3S|1|1B|C|38
4Z3S|1|1B|A|39
4Z3S|1|1B|U|40
4Z3S|1|1B|U|41
4Z3S|1|1B|C|42
4Z3S|1|1B|C|43
4Z3S|1|1B|G|44

Current chains

Chain 1B
5S Ribosomal RNA

Nearby chains

Chain 14
50S ribosomal protein L31
Chain 1A
Large subunit ribosomal RNA; LSU rRNA
Chain 1G
50S ribosomal protein L5
Chain 1S
50S ribosomal protein L18

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