HL_4Z3S_165

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

GGACGGAAAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4Z3S_165 not in the Motif Atlas

Homologous match to HL_9DFE_053

Geometric discrepancy: 0.1325

The information below is about HL_9DFE_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4Z3S|1|2A|G|2303
4Z3S|1|2A|G|2304
4Z3S|1|2A|A|2305
4Z3S|1|2A|C|2306
4Z3S|1|2A|G|2307
4Z3S|1|2A|G|2308
4Z3S|1|2A|A|2309
4Z3S|1|2A|A|2310
4Z3S|1|2A|A|2311
4Z3S|1|2A|U|2312
4Z3S|1|2A|C|2313

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2B

5S ribosomal RNA; 5S rRNA

Chain 2G

50S ribosomal protein L5